Class

The component of the operating model that controls harvest.

Slots

Name: Character. Identifying name
type_PT: Character. Whether to manage preterminal fishery catch from exploitation rate ("u") or catch target ("catch"). Default is "u",
type_T: Character. Whether to manage terminal fishery catch from exploitation rate ("u") or catch target ("catch"). Default is "u",
u_preterminal: Numeric. If type_PT = "u", the exploitation rate of the immature stock in the pre-terminal fishery. This will be converted to an instantaneous fishing mortality rate, i.e., F_preterminal = -log(1 - u_preterminal).
u_terminal: Numeric. If type_T = "u", The exploitation rate of the return in the terminal fishery. This will be converted to an instantaneous fishing mortality rate, i.e., F_terminal = -log(1 - u_terminal).
K_PT: Numeric. If type_PT = "catch", the catch target of the immature stock in the pre-terminal fishery.
K_T: Numeric. If type_T = "catch", the catch target of the return in the terminal fishery.
MSF_PT: Logical. Whether to implement mark-selective fishing in the preterminal fishery, with no retention on unmarked fish.
MSF_T: Logical. Whether to implement mark-selective fishing in the terminal fishery, with no retention on unmarked fish.
release_mort: Vector length 2. The proportion of released fish that die after release, in the pre-terminal and terminal fishery. Implemented to model mark-selective fishing. Not used if either MSF_PT or MSF_T is FALSE.
vulPT: Vector length maxage or matrix [nsim, maxage]. Vulnerability schedule (between 0-1) in the preterminal fishery. Values indicate the proportion of fishing mortality experienced by each age class, where F_preterminal = -log(1 - u_preterminal).
vulT: Vector length maxage or matrix [nsim, maxage]. Vulnerability schedule (between 0-1) in the terminal fishery. Values indicate the proportion of fishing mortality experienced by each age class, where F_terminal = -log(1 - u_terminal).

Creating Object

Objects can be created by calls of the form new("Harvest")

Examples

showClass("Harvest")
#> Class "Harvest" [package "salmonMSE"]
#> 
#> Slots:
#>                                                                             
#> Name:           Name       type_PT        type_T u_preterminal    u_terminal
#> Class:     character     character     character       numeric       numeric
#>                                                                             
#> Name:           K_PT           K_T        MSF_PT         MSF_T  release_mort
#> Class:       numeric       numeric       logical       logical       numeric
#>                                   
#> Name:          vulPT          vulT
#> Class:    num.matrix    num.matrix
#> 
#> Extends: "Harvest.list"