Skip to contents

Compare simulation runs

Source: R/compare.R
compare_spawners.Rd

Create figures that compare results across two dimensions

Usage

compare_spawners(SMSE_list, Design, prop = FALSE, FUN = median)

compare_fitness(SMSE_list, Design, FUN = median)

compare_escapement(SMSE_list, Design, FUN = median)

Arguments

SMSE_list

A list of SMSE objects returned by salmonMSE()

Design

A data frame with two columns that describes the factorial design of the simulations. Used to label the figure. Rows correspond to each object in SMSE_list. There two columns are variables against which to plot the result. See example in https://docs.salmonmse.com/articles/decision-table.html.

prop

Logical, whether to plot absolute numbers over proportions

FUN

Summarizing function across simulations, typically stats::median() or base::mean()

Value

A ggplot object

Details

  • compare_spawners() generates a time series of the composition of spawners

  • compare_fitness() generates a time series of metrics (fitness, PNI, pHOS, and pWILD) related to hatchery production

  • compare_escapement() generates a time series of the proportion of spawners and broodtake to escapement